南京大学学报(自然科学版) ›› 2024, Vol. 60 ›› Issue (1): 2637.doi: 10.13232/j.cnki.jnju.2024.01.004
唐蕴芯1, 廖梅2, 张艳玲2(), 张建1,4(), 陈皓3, 王炜1,4()
Yunxin Tang1, Mei Liao2, Yanling Zhang2(), Jian Zhang1,4(), Hao Chen3, Wei Wang1,4()
摘要:
乳腺超声广泛应用于乳腺肿瘤诊断,基于深度学习的肿瘤良恶性分类模型可以有效地辅助医生诊断,提高效率,降低误诊率,然而,由于标注数据的高成本问题,限制了此类模型的开发和应用.为此,从乳腺超声视频中构建了无标注预训练数据集,包含11805个目标样本数据和动态生成的正、负样本数据集(样本量分别为188880和1310355个).基于该数据集,搭建了三胞胎网络并进行了自监督对比学习.此外,还发展了Hard Negative Mining和Hard Positive Mining方法来选取困难的正负样本构建对比损失函数,加快模型收敛.参数迁移后,将三胞胎网络在SYU数据集上进行微调和测试.实验结果表明,与基于ImageNet预训练的若干SOTA模型以及与前人针对乳腺超声的多视图对比模型相比,提出的三胞胎网络模型具有更强的泛化能力和更好的分类性能.此外,还测试了模型对标注数据量的需求下限,发现仅使用96个标注数据,模型性能即可达到
中图分类号:
1 | Noble J A, Boukerroui D. Ultrasound image segmentation:A survey. IEEE Transactions on Medical Imaging,2006,25(8):987-1010. |
2 | Melendez J, Sánchez C I, Philipsen R H H M,et al. An automated tuberculosis screening strategy combining X?ray?based computer?aided detection and clinical information. Scientific Reports,2016,6:25265. |
3 | Lakhani P, Sundaram B. Deep learning at chest radiography:Automated classification of pulmonary tuberculosis by using convolutional neural networks. Radiology,2017,284(2):574-582. |
4 | Setio A A A, Ciompi F, Litjens G,et al. Pulmonary nodule detection in CT images:False positive reduction using multi?view convolutional networks. IEEE Transactions on Medical Imaging,2016,35(5):1160-1169. |
5 | Pesce E, Withey S J, Ypsilantis P P,et al. Learning to detect chest radiographs containing pulmonary lesions using visual attention networks. Medical Image Analysis,2019,53:26-38. |
6 | Evain E, Raynaud C, Ciofolo?Veit C,et al. Breast nodule classification with two?dimensional ultrasound using Mask?RCNN ensemble aggregation. Diagnostic and Interventional Imaging,2021,102(11):653-658. |
7 | Gao Y H, Liu B, Zhu Y,et al. Detection and recognition of ultrasound breast nodules based on semi?supervised deep learning:A powerful alternative strategy. Quantitative Imaging in Medicine and Surgery,2021,11(6):2265-2278. |
8 | Lei Y, He X X, Yao J C,et al. Breast tumor segmentation in 3D automatic breast ultrasound using Mask scoring R?CNN. Medical Physics,2021,48(1):204-214. |
9 | Cui W J, Peng Y S, Yuan G,et al. FMRNet:A fused network of multiple tumoral regions for breast tumor classification with ultrasound images. Medical Physics,2022,49(1):144-157. |
10 | Dosovitskiy A, Beyer L, Kolesnikov A,et al. An image is worth 16×16 words:Transformers for image recognition at scale∥The 9th International Conference on Learning Representations. Online,2021. |
11 | Al-Dhabyani W, Gomaa M, Khaled H,et al. Dataset of breast ultrasound images. Data in Brief,2020,28:104863. |
12 | Yap M H, Pons G, Martí J,et al. Automated breast ultrasound lesions detection using convolutional neural networks. IEEE Journal of Biomedical and Health Informatics,2018,22(4):1218-1226. |
13 | Zhang Y T, Xian M, Cheng H D,et al. BUSIS:A benchmark for breast ultrasound image segmentation. Healthcare,2022,10(4):729. |
14 | Jaiswal A, Babu A R, Zadeh M Z,et al. A survey on contrastive self?supervised learning. Technologies,2020,9(1):2. |
15 | Han X, Zhang Z Y, Ding N,et al. Pre?trained models:Past,present and future. AI Open,2021,2:225-250. |
16 | Thrun S, Pratt L. Learning to learn:Introduction and overview∥Thrun S,Pratt L. Learning to learn. Springer Berlin Heidelberg,1998:3-17. |
17 | Pan S J, Yang Q. A survey on transfer learning. IEEE Transactions on Knowledge and Data Engineering,2010,22(10):1345-1359. |
18 | Huang G, Liu Z, Van Der Maaten L,et al. Densely connected convolutional networks∥Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition. Honolulu,HI,USA:IEEE,2017:2261-2269. |
19 | He K M, Fan H Q, Wu Y X,et al. Momentum contrast for unsupervised visual representation learning∥Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition. Seattle,WA,USA:IEEE,2020:9726-9735. |
20 | van den Oord A, Li Y Z, Vinyals O. Representation learning with contrastive predictive coding. 2018,arXiv:. |
21 | Dyer C. Notes on noise contrastive estimation and negative sampling. 2014,arXiv:. |
22 | Chen T, Kornblith S, Norouzi M,et al. A simple framework for contrastive learning of visual representations∥The 37th International Conference on Machine Learning. Online:PMLR,2020:1597-1607. |
23 | Zhang S, Liao M, Wang J,et al. Fully automatic tumor segmentation of breast ultrasound images with deep learning. Journal of Applied Clinical Medical Physics,2023,24(1):E13863. |
24 | Zhang S, Tang T Y, Peng X,et al. Automatic localization and identification of thoracic diseases from chest X?rays with deep learning. Current Medical Imaging,2022,18(13):1416-1425. |
25 | Fei-Fei L, Deng J, Li K. ImageNet:Constructing a large?scale image database. Journal of Vision,2009,9(8):1037. |
26 | He K M, Zhang X Y, Ren S Q,et al. Deep residual learning for image recognition∥Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition. Las Vegas,NV,USA:IEEE,2016:770-778. |
27 | Lee C Y, Xie S N, Gallagher P,et al. Deeply?supervised nets∥Proceedings of the 8th International Conference on Artificial Intelligence and Statistics. San Diego,CA,USA:JMLR.org,2015:562-570. |
28 | Ren S Q, He K M, Girshick R,et al. Faster R?CNN:Towards real?time object detection with region proposal networks. IEEE Transactions on Pattern Analysis and Machine Intelligence,2017,39(6):1137-1149. |
29 | Gidaris S, Komodakis N. Object detection via a multi?region and semantic segmentation?aware CNN model∥Proceedings of the IEEE International Conference on Computer Vision. Santiago,Chile:IEEE,2015:1134-1142. |
30 | Long J, Shelhamer E, Darrell T. Fully convolutional networks for semantic segmentation∥Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition. Boston,MA,USA:IEEE,2015:3431-3440. |
31 | Vinyals O, Toshev A, Bengio S,et al. Show and tell:A neural image caption generator∥Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition. Boston,MA,USA:IEEE,2015:3156-3164. |
32 | Johnson J, Karpathy A, Fei?Fei L. DenseCap:Fully convolutional localization networks for dense captioning∥Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition. Las Vegas,NV,USA:IEEE,2016:4565-4574. |
33 | Otsu N. A threshold selection method from gray?level histograms. IEEE Transactions on Systems,Man,and Cybernetics,1979,9(1):62-66. |
34 | Anton J, Castelli L, Chan M F,et al. How well do self?supervised models transfer to medical imaging? Journal of Imaging,2022,8(12):320. |
35 | Guo Y F, Yang C Q, Lin T C,et al. Self supervised lesion recognition for breast ultrasound diagnosis∥2022 IEEE 19th International Symposium on Biomedical Imaging (ISBI). Kolkata,India:IEEE,2022:1-4. |
[1] | 钱多, 殷俊. 基于俯视角融合的多模态三维目标检测[J]. 南京大学学报(自然科学版), 2023, 59(6): 996-1002. |
[2] | 乔禹涵, 贾彩燕. 基于图自监督对比学习的社交媒体谣言检测[J]. 南京大学学报(自然科学版), 2023, 59(5): 823-832. |
[3] | 刘思源, 毛存礼, 张勇丙. 基于领域知识图谱和对比学习的汉越跨境民族文本检索方法[J]. 南京大学学报(自然科学版), 2023, 59(4): 610-619. |
[4] | 王昱翔, 葛洪伟. 基于U2⁃Net的金属表面缺陷检测算法[J]. 南京大学学报(自然科学版), 2023, 59(3): 413-424. |
[5] | 谭嘉辰, 董永权, 张国玺. SSM: 基于孪生网络的糖尿病视网膜眼底图像分类模型[J]. 南京大学学报(自然科学版), 2023, 59(3): 425-434. |
[6] | 杨京虎, 段亮, 岳昆, 李忠斌. 基于子事件的对话长文本情感分析[J]. 南京大学学报(自然科学版), 2023, 59(3): 483-493. |
[7] | 周业瀚, 沈子钰, 周清, 李云. 基于生成式对抗网络的自监督多元时间序列异常检测方法[J]. 南京大学学报(自然科学版), 2023, 59(2): 256-262. |
[8] | 卞苏阳, 严云洋, 龚成张, 冷志超, 祝巧巧. 基于CXANet⁃YOLO的火焰检测方法[J]. 南京大学学报(自然科学版), 2023, 59(2): 295-301. |
[9] | 王津, 谭安辉, 顾沈明. 基于弱监督对比学习的弱多标记特征选择[J]. 南京大学学报(自然科学版), 2023, 59(1): 85-97. |
[10] | 林灏昶, 秦云川, 蔡宇辉, 李肯立, 唐卓. 基于目标检测的图形用户界面控件识别方法[J]. 南京大学学报(自然科学版), 2022, 58(6): 1012-1019. |
[11] | 唐伟佳, 张华, 侯志荣. 基于空间卷积融合的中文文本匹配方法[J]. 南京大学学报(自然科学版), 2022, 58(5): 868-875. |
[12] | 周佳倩, 林培光, 李庆涛, 王基厚, 刘利达. MDDE:一种基于投资组合的金融市场趋势分析方法[J]. 南京大学学报(自然科学版), 2022, 58(5): 876-883. |
[13] | 罗思涵, 杨燕. 一种基于深度学习和元学习的出行时间预测方法[J]. 南京大学学报(自然科学版), 2022, 58(4): 561-569. |
[14] | 杜渊洋, 邓成伟, 张建. 基于深度卷积神经网络的RNA三维结构打分函数[J]. 南京大学学报(自然科学版), 2022, 58(3): 369-376. |
[15] | 陈轶洲, 刘旭生, 孙林檀, 李文中, 方立兵, 陆桑璐. 基于图神经网络的社交网络影响力预测算法[J]. 南京大学学报(自然科学版), 2022, 58(3): 386-397. |
|